KodDNA|Eminent Biosciences Products|Protein Biochemical Property Alignment and Coloring Tool|Anuraj Nayarisseri|Indore|

Protein Biochemical Property Alignment

Color is chosen based on the biochemical properties of the Amino Acid Residues.

Format Conversion

EMBL2FASTA

INPUT PROTEIN SEQUENCE OF YOUR INTEREST

>sample sequence1
-------------------MSDSLNHPSSSTVHADDGFEPPTSPEDNNKK
PSLEQIKQEREALFTDLFADRRRSARSVIEEAFQNELMSAEPVQPNVPN-
-PHSIPIRFRHQPVAGPAHDVFGDAVHSIFQKIMSRGVNADYSHWMSYWI
ALGIDKKT-QMNYHMKPFCKDTYATEGSLEAKQTFTDKIRSAVEEIIWKS
AEYCDILSEKWTGIHVSADQLKGQRNKQEDRFVAYPNGQYMNRGQ-SDIS
LLAVFDGHGGHECSQYAAAHFWEAWSDAQHHHSQDMKLDELLEKALETLD
ERMTVRSVRESWKGGTTAVCCAVDLNTNQIAFAWLGDSPGYIMSNLEFRK
FTTEHSPSDPEECRRVEEVGGQIFVIGGELRVNGVLNLTRALGDVPGRPM
ISNKPDTLLKTIEPADYLVLLACDGISDVFNTSDLYNLVQAFVNEYDVED
YHELARYICNQAVSAGSADNVTVVIGFLRPPEDVWRVMKTDSDDEESELE
EEDDNE
>sample sequence2
--------------------------------------------------
--MEKVNEERDAVFEDHIGDRRRSVRSLLEEAFADEMEKTSYDVEVADTP
-QPHIPIRFRHPPIAGPVHDVFGDAIHDIFQKMMKRGQAVDFCHWVSHLI
ATEIDEKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKIWPAIDKILQQN
AETCPILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRGE-DPIS
VLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLD
ERMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQ
LTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPM
ISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVED
YAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKHESDDEDSDVT
DEE---
>sample sequence3
MSGPPPPKTNEKSSQPVTGRSQEPTRKGQLGPNYLRIIEEDEEYGHALLE
PSEEQIKFEREALFEDLHLDRQRSARSFIEETFEEEMLGPQNGIPPTTES
PQSYIPIRYRNPPAAAPVHDVFGDAVHAIFQKLMTRGPPVEYCHWMSYWI
AKQIDKDS-PVKYHECRFTPDQYVTENTAEAKKTYMDNMWKAAEKNLWMY
TYNSPLLRTKWTGIHVSAEQIKGQRHKQEDRFVAYPNSLYMDTSRSDHIA
LLGVFDGHGGHECSQYAAGHMWETWIETRASHFEEP-LEKQLKTSLDLLD
ERMTVRSTKECWKGGTTAVCCAIDMNKKELAFAWLGDSPGYIMDNLEVRK
VTRDHSPSDPEEGRRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPM
ISNQAETCQRDIEVGDYLVILACDGISDVFNTSDLYNLVQAYVNENPVEE
YNDLAHYICHEAIAHGSTDNVTVVIGFLRPPQDLWRMMKIDEESDEEEDE
VDDE--

Show residues per line.

Identity or similarity coloring to be added:

Used colored .

Enter the starting positions of the sequences separated by commas (to alter residue numbering). An example entry is: 0, 200, 0, -1. If no numbers are given, the default starting position of 0 is used for each sequence.

Sequence Mapping

Sequence Analysis

ORF Finder	Protein GRAVY	Prot Iso Point	Prot Patrn srch	Restriction sites	DNA Mol Wt
DNA Stats	Fuzzy Nuc	Pairwise Prot	DNA Ptrn srch	Mutate Digest	Protein Mol Wt
Protein Stats	Fuzzy Pro	Pairwise DNA	Idntity & Simlari	Restrict Digest	PCR Primer St
Translate DNA	Reverse Trans	Rev. Complnt	CpG Islands	Multi Rev Trans	PCR Product